Tandem Repeat Explorer

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TRExplorer Catalog	# of loci

Variation Clusters

Known Disease-associated TR Loci

Other Genome-wide TR Catalogs	# of loci

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Polymorphism

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Search by region, gene, or transcript: Examples: chr4:3074000-3075000 , ATXN1 , ENSG00000165060 , ENST00000370475

Search TR Catalog

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TRExplorer catalog 4,863,041 loci

Illumina 174k 174,286 loci

Known disease-associated loci 63 loci

Gene Region(s)

Coding

5' UTR

3' UTR

Promoter

Intron

Intergenic

Exon (non-coding transcript)

Motif Size(s)

Motif(s) motifs of known disease-associated loci >

Polymorphism Filter

Polymorphism filter:

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σ_HPRC100

σ_AoU1027

σ_10k10k

σ_1kGP

σ_T2T

≥

Variation Cluster Filter

Variation cluster (VC) filter:

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Exclude VCs

Exclude VCs ≥ +50bp

Keep only VCs

Keep only VCs ≥ +50bp

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