| 1/16/2026 |
- Database updated to the latest version of the v2 catalog.
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| 1/7/2026 |
- Updated to the latest draft release of TRExplorer catalog v2 and variation clusters
- Updated population data from HPRC100 to HPRC256 (256 PacBio HiFi genomes)
- Added non-coding annotations from the Talkowski lab, including ultra-conserved elements (UCEs), human accelerated regions (HARs), VISTA enhancers, fetal cortex enhancers/silencers, and ABC enhancer predictions
- Added percentile rank display for polymorphism statistics (e.g., "top 1% by motif")
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| 11/10/2025 |
- Added separate locus-specific pages
- Fixed IGV.js track loading speed - tracks now load much faster
- Loaded TRExplorer catalog v2.0 draft which improves coverage of VNTRs by adding loci from the Vamos v2.1 catalog
- Added motif frequencies computed via the Vamos v2.1 pipeline - shared by Bida Gu and Mark Chaisson. See [Gu et al. 2025]
- Added new columns to the results table, including 'Motif Variability', 'Source', 'Repeat Masker', and others
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| 10/31/2025 |
- Fixed AoU1027 stdev values to be the standard deviation of the number of repeats of the longest pure segment. Previously, they were erroneously shown as the true value divided by the motif size.
- Fixed IGV.js track loading speed - tracks now load much faster
- Loaded TRExplorer catalog v2.0 draft which improves coverage of VNTRs by adding loci from the Vamos v2.1 catalog
- Added motif frequencies computed via the Vamos v2.1 pipeline - shared by Bida Gu and Mark Chaisson. See [Gu et al. 2025]
- Added new columns to the results table, including 'Motif Variability', 'Source', 'Repeat Masker', and others
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| 6/18/2025 |
Added FAQ page |
| 5/25/2025 |
Initial release of TRExplorer |